Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936014.1_cds_XP_016481663.1_72971
CDS Infomation

[gene=LOC107802647] [db_xref=GeneID:107802647] [protein=kinesin-like protein KIN12B] [partial=3'] [protein_id=XP_016481663.1] [location=join(34934..35281,36770..36907,37091..37174,37289..37414,37510..37569,37656..37709,37814..37906,38812..38907,39160..39305,40194..40343,40439..40568,40674..41930,42020..42118,42202..42354,42433..>43095)] [gbkey=CDS]
Sequence

ATGAAGCACTTTACGCAACAGAGAAACACAATCTTAAGGGAGAATCACGAGGCCGCAGCT
ACAATGCCATCATCTCCAAATCCTAGCTCTTTAAAGCAGAAGTTCACAACATCACCTATC
AACCCTAGTAGCAACAGTAACAGAAAGCATAACAAATCATCTAAAGAAAATGCTCCTCCG
ATGAATCACCTGTCCGATCCAAACTTGTCCCCGGCCGTTGGATTGAAGATCAAGAGTCCT
CTACCTCCCCGTCCGCCGCCTAACTCCAATCATTTGAAACGGAAGCTCAATTTGGAGTCC
GTTGGTACTGAGAATGGCAACGCTGGATCTTCTGACTCTGGGGTCAAGGTCATAGTGAGG
ATGAGGCCGCCAACCAAGGATGAGGAAGAAGGGGAAGTTGTCGTCCAGAAAGTCGCTAAT
GATTCTTTATCAATAGCTGGGCATACATTTACATTTGACTCTATTGCAGATACTCAATCA
ACACAGCTTGATATATACCAGCATCTGGGAGCTCCTCTGGTTGAAAATTGTCTTGCTGGG
TTTAACAGCTCAGTATTTGCTTATGGACAGACTGGTAGCGGAAAGACATATACAATTTGG
GGACCAGCCAACGCCTTGTTGGAAGAAAATTTAACCAATGATCAACAGGGCTTAGCCCCA
CGCGTTTTTCAGCAGCTATTTGAACGTATTAAGGAGGAACAAACCAAGCATGCCGACAAG
CAGCTCGTGTATCAGTGTCAATGTTCTTTTCTTGAGATATACAATGAGCAAATCACTGAT
TTGTTGGATCCTAGTCAAAGAAACCTCCAGATTAGGGAAGATGTAAGAACAGGTGTTTAT
GTGGAAAATTTGACTGAGGAATGTGTTTCCACCATGAAGGATGTGACAAAGCTTTTGATG
AAGGGACTGTCAAACAGGAGAACTGGTGCTACTAGTATAAATGCTGAGAGTTCACGTTCT
CACAGTGTATTCACCTGTGTTGTTGAATCACGATGCAAGAGCTTGGCAGATGGTTTAAGC
CACCTAAAGAGGAGTAGAATAAATCTTGTTGATCTTGCTGGATCAGAAAGGCAAAAGCTA
ACTGGTGCAGCAGGTGAGCGCCTGAAGGAAGCAGGGAACATCAACAGATCACTTTCACAG
TTGGGGAACTTAATAAACATTCTTGCAGAAGTTTCTCAAACGGGCAAGCATAGGCACATA
CCCTATAGAGATTCCAAGTTGACATTTTTGCTACAGGAATCTCTCGGCGGGAACGCAAAG
CTTGCAATGATCTGTGCCGTTTCTCCATCCCAAAGTTGTAAGAGTGAGACTTTCAGTACC
CTGAGATTTGCCCAACGTGCAAAGGCAATCAAGAATAAGGCGGTAGTCAATGAAGAAATG
CAAGATGATGTAAATGCTTTGAGAGAAGTTATACGTCAGCTACGGGAGGAACTGCTAAGA
ATGAAGGCAAATGGATATCAAGCAGATCAAAATGGAAATTATTCATCAGGATGGAGTGTT
CGCAGAAGCTTAAATCAATTAAAATTCAGTCTTAACCATCCAGTGACACTACCTATTGAT
GGTGACGGTGATACAGAAATGGAAATTGTGGACGAAGCCGAACTGTTAGGTCTCTTGTCC
GGAGGCAGCAAAGAGAATAGTATGCTTGGGATCCTGCGAAAGACTTTTTCAAAAGGTTCA
TCACTACTTGATTCTGCAGTACAGCATGGGGAAAATGAGAATGACTGCAACAGGGAGCAA
GGCTCCGAGTATATGGATGTTACCATGGAGGAAGAGGTATCTGACGCAGTTGTCGAGCAT
GAAAATGATACTGTTGATGGACTTCAGAGCACCAAGAAGAGTTTAATTGTGGACGAGTCG
TTTTGCAAAGGTAGCATAGGAGAAACTGTTGAGGCTGATTTGGATCGTTCATTAGTGAAA
AAGCTAGGTAATGATTCTTCTATGAAGCCAACTGAAGATGAGTATCTTCTGTCTTCTGCC
AGCGATATGCTAAATCAAGGGCGAAGGGAAGTGGTAGAGGACTCTCCATCAGAGCAATAT
TCTGAACGGACTCCAGAGAACTCTTCTAAATGCTTGGAGGGCAATACAACCTGCACTAAC
CTCAGTATAGTTCCATGTGATGTGTCACCTATTTTAGACTCTCCCACTCCAAGTGTTTCA
CCAAGAGCTAATAGCAGTAGAAAAAGTTTTAAGACTTCAATGCTGAGTGCTTCAGAAAAG
GATCTTGGAGATAAAATGGATAACCCGAACTTGTCCTTCACAAAGCCATCAAACAGTATT
TGTTTGAATTCTCTAACAAGTCAAAGACACAAAAGTTGTTTCACATCAACTGAGCATTTG
GCGGCTAGTCTTCAGCGGGGACTTGAAATTATTAGTACTCATAGACAAAGTACATCTTTG
AGGCGCTCCTCGGTCAGATTTTCTTGCAAGCCTTCTGAAATTAGTGCAATTATACCAGTT
GCTAAAATAGATGTTGGAGTTCAAACTGTTATCGAAGATGATGAATCATTTGAAAGAGGT
TTAACATTTTTGTGTAGTAAATGTAAGGCAAGAAATTCGCTACAAGAGCTTAAAGATGCT
GATGATGGCTCAAATTTGCAGTTGGTACCTGTTAATGGATCACAGTTGGTATCTGAAACT
GGATCACAGTCCTGTGAAAACTTACAGATTCAAGTTCCTAAAGCAGTAGAAAAGGTCTTG
GCTGGAGCTATACGGAGAGAGATGGCCCTTGAAGATATATGTGCCAAGCAAACTTCTGAG
ATCATGCAACTCAATCGATTGATCCAGCAATACAAACATGAACGAGAATGCAACGCTATA
ATTAGCCAAACACGTGAAGATAAGATCATTCTCCTTGAGAGTTATATGGATGGAATTTTA
CCAAAGGAGGAGTTCATGGAGGATGAGTTGTTGGCGCTGATTCACGAGCATAAGCTTCTG
AAGGCAAAGTATGAGAATCATCCTGAAGTTTTAAGTGCCAGACTTGAACTAAGAAGAGTT
CAAGAGGAGCTGGAGCGGTATCGTAATTTCTTTAAATTAGGTGAGAGGGATGTTTTGCTG
GAGGAGATTCAGGATTTGAGGAGCCAGCTACAGTTTTACGTGGACTCTTCACCAAAGTCA
TCCAGGAAAGGAAATTCTCTTCTACAATTAACTTATCCATGTGAACCCAGTGTGCCTCCA
ACTTTATCCACGATTCCAGAGTCAGATGAGGAGAGTTCTGAACAGAGACTTGAAAGGGAG
AGAATTCAGTGGACTGAAACAGAGAGTAAGTGGATTTCTTTGGTAGAAGAGTTGAGGTTA
GACCTACAAGCTAGCCGCACATTGTCTGAAAAACGAAAACAAGAACTAGATCTGGAAACG
AAATGCTCGGAAGAGCTGAAAGAAGCAATGCAGAGGGCCATGCAGGGCCATGCACGCATG
ATTGAACAGTACGCTGAACTTGAGGAGAGACATATTCAACTCCTTGCGAGACATAGGAAG
GTCCAAGTTGGCATAGAAGATGTTAAAAAAGCAGCCACAAAAGCAGGAGTTAGAGGTGCT
GAATCTAAATTCATAAATGCTCTTGCTGCAGAACTTTCAGCTCTGAAAGTGGAGAGG

Peptide Sequence

PEP ID

XP_016481663.1
PEP Infomation

PREDICTED: kinesin-like protein KIN12B, partial [Nicotiana tabacum]
Sequence

MKHFTQQRNTILRENHEAAATMPSSPNPSSLKQKFTTSPINPSSNSNRKHNKSSKENAPP
MNHLSDPNLSPAVGLKIKSPLPPRPPPNSNHLKRKLNLESVGTENGNAGSSDSGVKVIVR
MRPPTKDEEEGEVVVQKVANDSLSIAGHTFTFDSIADTQSTQLDIYQHLGAPLVENCLAG
FNSSVFAYGQTGSGKTYTIWGPANALLEENLTNDQQGLAPRVFQQLFERIKEEQTKHADK
QLVYQCQCSFLEIYNEQITDLLDPSQRNLQIREDVRTGVYVENLTEECVSTMKDVTKLLM
KGLSNRRTGATSINAESSRSHSVFTCVVESRCKSLADGLSHLKRSRINLVDLAGSERQKL
TGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKHRHIPYRDSKLTFLLQESLGGNAK
LAMICAVSPSQSCKSETFSTLRFAQRAKAIKNKAVVNEEMQDDVNALREVIRQLREELLR
MKANGYQADQNGNYSSGWSVRRSLNQLKFSLNHPVTLPIDGDGDTEMEIVDEAELLGLLS
GGSKENSMLGILRKTFSKGSSLLDSAVQHGENENDCNREQGSEYMDVTMEEEVSDAVVEH
ENDTVDGLQSTKKSLIVDESFCKGSIGETVEADLDRSLVKKLGNDSSMKPTEDEYLLSSA
SDMLNQGRREVVEDSPSEQYSERTPENSSKCLEGNTTCTNLSIVPCDVSPILDSPTPSVS
PRANSSRKSFKTSMLSASEKDLGDKMDNPNLSFTKPSNSICLNSLTSQRHKSCFTSTEHL
AASLQRGLEIISTHRQSTSLRRSSVRFSCKPSEISAIIPVAKIDVGVQTVIEDDESFERG
LTFLCSKCKARNSLQELKDADDGSNLQLVPVNGSQLVSETGSQSCENLQIQVPKAVEKVL
AGAIRREMALEDICAKQTSEIMQLNRLIQQYKHERECNAIISQTREDKIILLESYMDGIL
PKEEFMEDELLALIHEHKLLKAKYENHPEVLSARLELRRVQEELERYRNFFKLGERDVLL
EEIQDLRSQLQFYVDSSPKSSRKGNSLLQLTYPCEPSVPPTLSTIPESDEESSEQRLERE
RIQWTETESKWISLVEELRLDLQASRTLSEKRKQELDLETKCSEELKEAMQRAMQGHARM
IEQYAELEERHIQLLARHRKVQVGIEDVKKAATKAGVRGAESKFINALAAELSALKVER

Transcript Sequence

Gene sequence data has not been registered.